Package index • ggpedigree

All functions

ASOIAF: A pedigree of ice and fire
calculateConnections(): Calculate connections for a pedigree dataset
calculateCoordinates(): Calculate coordinates for plotting individuals in a pedigree
computeDistance(): Compute distance between two points
countOffspring(): Count offspring of each individual
countSiblings(): Count siblings of each individual
generateSpouseList(): Generate a spouselist matrix
getDefaultPlotConfig(): Shared Default Plotting Configuration
ggPedigree() ggpedigree(): Plot a custom pedigree diagram
ggPedigreeInteractive(): Interactive pedigree plot (Plotly wrapper around ggPedigree)
ggPhenotypeByDegree(): Plot correlation of genetic relatedness by phenotype
ggRelatednessMatrix(): Plot a relatedness matrix as a heatmap (ggpedigree style)
kinship2_autohint(): Automatically generate alignment hints for pedigree plotting
kinship2_plotPedigree() plotPedigree(): plotPedigree A wrapped function to plot simulated pedigree from function simulatePedigree. This function require the installation of package kinship2.
optimizePedigree(): Optimize Pedigree Plot
optimizePlotlyPedigree(): Optimize Plotly Pedigree Plot
pedigree() `[`(<pedigreeList>) `[`(<pedigree>) print(<pedigree>) print(<pedigreeList>): Create a pedigree or pedigreeList object
redsquirrels redsquirrels_full: Kluane Red Squirrel Data
warsofroses: Wars of the Roses Pedigree Data