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Changelog

Source: NEWS.md

ggpedigree 0.7.1

  • Fixed focal_fill ID being indexed to row order, rather than the ID order.
  • Fixed bug in using fam_x and fam_y in with generation_height

ggpedigree 0.7.0

CRAN release: 2025-06-09

  • Changed the default behavior of ggPedigree to use x_fam and y_fam for positioning families, rather than x_midparent and y_midparent. This change allows for better visualization of pedigrees with multiple families.
  • Changed the get midpoint of curvature to better approximate geom_curv behavior.
  • reduced redundancy in code base by not calculating the parent midpoints when not needed.
  • Added default_config support for ggRelatednessMatrix functions.

ggpedigree 0.6.1

ggpedigree 0.6.0

  • Implemented fill by matID, patID using several scales, such as hue, viridis, and others.
  • Added support for emojis in the ggpedigree function.
  • Solved the bug that created excessive branches
  • Made the twin sibling segments smarter
  • Adding more debug support

ggpedigree 0.5.1

  • Fix tooltip appearing in ggPedigreeInteractive when tooltip_include is set to FALSE.

ggpedigree 0.5.0

  • Added segment_linetype and custom affected labels to the ggpedigree function.
  • Added usage of color_palette to the ggpedigree function.
  • Added curvature option to the ggpedigree function.
  • Add support for custom affected labels for affected individuals in the ggpedigree function.
  • Add support for removing diagonal, upper triangle, and lower triangle in the ggRelatednessMatrix function.
  • Add support for labeling tiles
  • Added new tests for the ggRelatednessMatrix function.
  • Added new phenotype plotting function ggPhenotypebyDegree to visualize phenotypes by degree of relatedness.
  • Added new vignette to demonstrate ggPhenotypebyDegree.
  • Added a new function getDefaultPlotConfig to set default configuration options for the package.
  • Harmonized the configuration options across the package to use getDefaultPlotConfig and buildPlotConfig
  • Added unit tests for getDefaultPlotConfig and ggPhenotypebyDegree
  • Added workaround for plotly non-support for geom_curve with computeCurvedMidpoint
  • Adding fully twin plotting features
  • Added ability to fill colors as a function of the degree of relatedness to a focal person
  • Add getDefaultPlotConfig functionality to ggPhenotypebyDegree
  • Fully documented getDefaultPlotConfig so that each config option is clear and understandable.

ggpedigree 0.4.1

CRAN release: 2025-05-26

Status: Submitted to CRAN

  • Fixed a bug in the ggpedigree function that caused an error when using a custom ID name and requesting the plot to be returned as a ggplot object.

ggpedigree 0.4.0

CRAN release: 2025-05-23

  • Allows support for character-based IDs
  • Added linejoin, lineend, segment_self_linetype, option to the ggpedigree functions.
  • Added unit tests for calculateConnections, calculateConnections, and ggpedigree functions.
  • Refactored ggpedigree function into ggpedigree.core and .addScales and .addLabels functions to improve readability and maintainability.
  • Renamed symKey to makeSymmetricKey, extended it to support character-based IDs, and added unit tests.
  • Added a new function ggPedigreeInteractive to create interactive pedigree plots using plotly. Added a vignette to demonstrate its usage.
  • Added redsquirrels dataset to the package for testing and examples.
  • Added a new function ggRelatednessMatrix and subfunction ggRelatednessMatrix.core to create heatmaps of relatedness matrices.
  • Added new vignette to demonstrate ggRelatednessMatrix
  • Added graphic tests for ggpedigree, ggPedigreeInteractive, and ggRelatednessMatrix functions.
  • Updated the README and vignettes to reflect the new features and improvements.
  • Updated description to comply with CRAN policies.

ggpedigree 0.3.0

  • Expose more labeling options in the ggpedigree function to allow for more customization, including nudging labels, and changing the variable used.
  • Added option to add an outline to the pedigree plot.
  • Made the config options more consistent and user-friendly.
  • Enhance the narrative of the plotting vignette to demonstrate the new features and provide clearer examples.
  • Added missing examples to the ggpedigree function documentation.

ggpedigree 0.2.0

  • Extended functionality to include new plotting features, like handling multiple instances of the same individual in a pedigree.
  • Improved documentation and examples for better user guidance.
  • Added unit tests for describeHelpers

ggpedigree 0.1.0

  • Implemented pedigree plotting functions for ggplot2.
  • Added vignette to demonstrate the use of the package in basic plotting.
  • Created a DESCRIPTION file to define the package and its dependencies.
  • Added a LICENSE file to specify the terms under which the package can be used.
  • Created a CODE_OF_CONDUCT.md file to outline the expected behavior of contributors and maintainers.
  • Added a NEWS.md file to track changes to the package.
  • Created a CONTRIBUTING.md file to guide contributors on how to contribute to the package.
  • Added a README.Rmd file to provide an overview of the package and its functions.
  • Added a cran-comments.md file to document the submission process to CRAN.
  • Initial version launched