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This function restores the original column names of a pedigree dataframe based on user-specified names. It is useful for reverting standardized column names back to their original names after processing.

Usage

restorePedColnames(
  ped,
  famID = "famID",
  personID = "ID",
  momID = "momID",
  dadID = "dadID",
  gen = "gen",
  patID = "patID",
  matID = "matID",
  spID = "spID",
  twinID = "twinID",
  zygosity = "zygosity",
  sex = "sex",
  verbose = FALSE
)

Arguments

ped

A pedigree dataframe with standardized column names.

famID

The original name for the family ID column. Default is "fam ID".

personID

The original name for the person ID column. Default is "ID".

momID

The original name for the mother ID column. Default is "momID".

dadID

The original name for the father ID column. Default is "dadID".

gen

The original name for the generation column. Default is "gen".

patID

The original name for the paternal ID column. Default is "patID".

matID

The original name for the maternal ID column. Default is "matID".

spID

The original name for the spouse ID column. Default is "spID".

twinID

The original name for the twin ID column. Default is "twinID".

zygosity

The original name for the zygosity column. Default is "zygosity".

sex

The original name for the sex column. Default is "sex".

verbose

A logical indicating whether to print progress messages.

Value

A pedigree dataframe with restored original column names.