This function constructs an OpenMx model for a single family group based on
provided relatedness matrices and observed data. The implied covariance
is built as a weighted sum of the supplied relatedness matrices, where
the weights are variance component parameters shared across groups via
a parent ModelOne sub-model.
Usage
buildOneFamilyGroup(
group_name,
Addmat = NULL,
Nucmat = NULL,
Extmat = NULL,
Mtdmat = NULL,
Amimat = NULL,
Dmgmat = NULL,
full_df_row,
ytemp
)Arguments
- group_name
Name of the family group.
- Addmat
Additive genetic relatedness matrix (from
ped2add).- Nucmat
Nuclear family shared environment relatedness matrix (from
ped2cn).- Extmat
Extended family shared environment indicator. When non-NULL, a common-extended-environment term using a unit matrix is included.
- Mtdmat
Mitochondrial genetic relatedness matrix (from
ped2mit).- Amimat
Additive by mitochondrial interaction relatedness matrix.
- Dmgmat
Dominance genetic relatedness matrix.
- full_df_row
A 1-row matrix of observed data with column names matching
ytemp.- ytemp
A character vector of variable names corresponding to the observed data columns.